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Cofit
Protein
Homologs
Top cofit genes for IAI47_01450 from
Pantoea sp. MT58
AI-2E family transporter
SEED: Putative PerM family permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI47
_11590
type VI secretion system baseplate subunit TssF
no
0.32
2
IAI47
_10680
TetR/AcrR family transcriptional regulator
no
0.31
3
IAI47
_10720
transcriptional regulator SlyA
0.28
0.31
4
IAI47
_16920
beta-N-acetylhexosaminidase
no
0.31
5
IAI47
_15085
amylovoran biosynthesis protein AmsF
no
0.30
6
IAI47
_12890
MFS transporter
0.54
0.30
7
IAI47
_08655
transcriptional regulator BetI
no
0.30
8
IAI47
_19875
TetR/AcrR family transcriptional regulator
no
0.29
9
IAI47
_15815
pyruvate dehydrogenase complex transcriptional repressor PdhR
0.33
0.29
10
IAI47
_21410
metallophosphoesterase
0.53
0.28
11
IAI47
_20755
methionine synthase
no
0.28
12
IAI47
_07540
hypothetical protein
no
0.28
13
IAI47
_02935
Gfo/Idh/MocA family oxidoreductase
0.44
0.28
14
IAI47
_05025
alpha-2-macroglobulin family protein
no
0.27
15
IAI47
_13185
outer membrane protein OmpX
0.52
0.27
16
IAI47
_16295
urea ABC transporter ATP-binding protein UrtD
no
0.27
17
IAI47
_16945
pyridoxamine 5'-phosphate oxidase family protein
0.46
0.27
18
IAI47
_16185
MFS transporter
no
0.27
19
IAI47
_19215
hypothetical protein
no
0.27
20
IAI47
_15810
pyruvate dehydrogenase (acetyl-transferring), homodimeric type
no
0.27
Or look for
negative cofitness