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Gene
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Cofit
Protein
Homologs
Top cofit genes for IAI47_00585 from
Pantoea sp. MT58
DUF3574 domain-containing protein
SEED: Ribosomal protein S3
Rank
Hit
Name
Description
Conserved?
Cofitness
1
IAI47
_06490
Ig-like domain-containing protein
no
0.38
2
IAI47
_06510
HlyD family efflux transporter periplasmic adaptor subunit
no
0.34
3
IAI47
_06500
TolC family outer membrane protein
no
0.31
4
IAI47
_06505
type I secretion system permease/ATPase
no
0.31
5
IAI47
_06870
MdtB/MuxB family multidrug efflux RND transporter permease subunit
no
0.30
6
IAI47
_06565
YejL family protein
no
0.25
7
IAI47
_15015
OsmC family protein
no
0.25
8
IAI47
_06915
outer membrane assembly protein AsmA
no
0.25
9
IAI47
_14725
tRNA 4-thiouridine(8) synthase ThiI
no
0.24
10
IAI47
_08265
phosphoethanolamine transferase EptA
no
0.23
11
IAI47
_01935
peptidylprolyl isomerase A
no
0.23
12
IAI47
_10435
transcription modulator YdgT
no
0.22
13
IAI47
_14855
phosphate response regulator transcription factor PhoB
no
0.22
14
IAI47
_16630
tyrosine-type recombinase/integrase
no
0.22
15
IAI47
_09340
DUF1275 domain-containing protein
no
0.22
16
IAI47
_02705
DUF1107 domain-containing protein
0.55
0.21
17
IAI47
_04905
YfhL family 4Fe-4S dicluster ferredoxin
no
0.21
18
IAI47
_00500
ATP-dependent DNA helicase RecG
no
0.21
19
IAI47
_12925
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
no
0.21
20
IAI47
_03320
non-heme ferritin
0.22
0.21
Or look for
negative cofitness