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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS23805 from
Herbaspirillum seropedicae SmR1
patatin
SEED: Ferredoxin reductase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS24020
hypothetical protein
no
0.36
2
HSERO
_RS15025
LysR family transcriptional regulator
no
0.31
3
HSERO
_RS07065
GntR family transcriptional regulator
no
0.31
4
HSERO
_RS07350
hypothetical protein
no
0.29
5
HSERO
_RS07335
molybdenum ABC transporter substrate-binding protein
no
0.29
6
HSERO
_RS23705
hydrogenase
no
0.28
7
HSERO
_RS00190
LysR family transcriptional regulator
no
0.28
8
HSERO
_RS11260
aldehyde dehydrogenase
0.58
0.27
9
HSERO
_RS23970
membrane protein
no
0.27
10
HSERO
_RS22430
TonB-dependent receptor
no
0.27
11
HSERO
_RS13340
hypothetical protein
no
0.27
12
HSERO
_RS11075
hypothetical protein
no
0.27
13
HSERO
_RS23665
phosphonate ABC transporter substrate-binding protein
no
0.27
14
HSERO
_RS11480
D-ribose ABC transporter, substrate-binding component RbsB
(from data)
no
0.27
15
HSERO
_RS18075
hypothetical protein
no
0.26
16
HSERO
_RS20705
cobyrinic acid a,c-diamide synthase
no
0.26
17
HSERO
_RS08155
deacetylase
no
0.26
18
HSERO
_RS10995
hypothetical protein
no
0.25
19
HSERO
_RS18480
acyl carrier protein
no
0.25
20
HSERO
_RS08195
ABC transporter substrate-binding protein
no
0.25
Or look for
negative cofitness