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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS23735 from
Herbaspirillum seropedicae SmR1
phosphodiesterase
SEED: HDIG domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS01295
deoxyuridine 5'-triphosphate nucleotidohydrolase
no
0.47
2
HSERO
_RS12780
diguanylate phosphodiesterase
no
0.43
3
HSERO
_RS04290
DNA-binding protein
no
0.43
4
HSERO
_RS10675
diguanylate cyclase
no
0.38
5
HSERO
_RS03105
anti-sigma factor antagonist
no
0.38
6
HSERO
_RS17350
ABC transporter substrate-binding protein
no
0.37
7
HSERO
_RS22735
sugar ABC transporter substrate-binding protein
no
0.37
8
HSERO
_RS20205
membrane protein
no
0.36
9
HSERO
_RS20985
serine acetyltransferase
no
0.36
10
HSERO
_RS16110
hypothetical protein
no
0.35
11
HSERO
_RS01490
guanylate cyclase
no
0.34
12
HSERO
_RS13620
diguanylate cyclase
no
0.33
13
HSERO
_RS21530
cytochrome C550
no
0.33
14
HSERO
_RS14570
DNA-binding protein
no
0.33
15
HSERO
_RS10955
hypothetical protein
no
0.32
16
HSERO
_RS21020
imidazole glycerol phosphate synthase
no
0.32
17
HSERO
_RS20980
oxidoreductase
no
0.32
18
HSERO
_RS21040
3-oxoacyl-ACP synthase
no
0.32
19
HSERO
_RS06175
queuine tRNA-ribosyltransferase
no
0.32
20
HSERO
_RS09660
ribonuclease III
no
0.31
Or look for
negative cofitness