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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS23430 from
Herbaspirillum seropedicae SmR1
Zn-dependent hydrolase
SEED: SoxH protein, homolog
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02120
phosphomethylpyrimidine synthase ThiC
0.26
0.39
2
HSERO
_RS02135
phosphomethylpyrimidine kinase
no
0.38
3
HSERO
_RS02130
thiazole synthase
no
0.37
4
HSERO
_RS02125
thiamine biosynthesis protein ThiS
no
0.36
5
HSERO
_RS16840
competence damage-inducible protein A
no
0.34
6
HSERO
_RS00835
molybdopterin biosynthesis protein MoeB
no
0.33
7
HSERO
_RS08740
permease
no
0.30
8
HSERO
_RS15895
peptide ABC transporter permease
no
0.29
9
HSERO
_RS11085
L-aspartate oxidase
no
0.27
10
HSERO
_RS12350
histidine kinase
no
0.27
11
HSERO
_RS00430
glutamate--cysteine ligase
no
0.27
12
HSERO
_RS13800
glycosyl transferase family 1
no
0.27
13
HSERO
_RS13650
high-affinity Fe2+/Pb2+ permease
no
0.26
14
HSERO
_RS07965
cell shape determination protein CcmA
no
0.26
15
HSERO
_RS13255
cobyrinic acid a,c-diamide synthase
0.43
0.25
16
HSERO
_RS15280
secretion protein
no
0.25
17
HSERO
_RS20450
hypothetical protein
no
0.25
18
HSERO
_RS22130
hypothetical protein
no
0.25
19
HSERO
_RS16990
transcriptional regulator
no
0.25
20
HSERO
_RS02340
dihydroorotase
no
0.25
Or look for
negative cofitness