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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS23180 from
Herbaspirillum seropedicae SmR1
membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02615
polymerase
no
0.56
2
HSERO
_RS04295
diguanylate cyclase
no
0.53
3
HSERO
_RS21220
hypothetical protein
0.18
0.53
4
HSERO
_RS21195
hypothetical protein
no
0.53
5
HSERO
_RS01530
3',5'-cyclic-nucleotide phosphodiesterase
no
0.52
6
HSERO
_RS11405
transcriptional regulator
no
0.52
7
HSERO
_RS21225
hypothetical protein
no
0.51
8
HSERO
_RS21205
hypothetical protein
no
0.51
9
HSERO
_RS21200
glycosyl transferase family 1
no
0.51
10
HSERO
_RS03265
transcription regulator protein
no
0.50
11
HSERO
_RS21210
membrane protein
no
0.49
12
HSERO
_RS08020
heavy metal translocating P-type ATPase
0.17
0.49
13
HSERO
_RS10320
flagellar brake protein YcgR
no
0.48
14
HSERO
_RS16490
FimV
no
0.48
15
HSERO
_RS21425
5,10-methylenetetrahydrofolate reductase
no
0.46
16
HSERO
_RS10290
flagellar biosynthesis protein FliJ
0.37
0.46
17
HSERO
_RS10295
ATP synthase
no
0.45
18
HSERO
_RS05855
flagellar motor protein MotA
no
0.45
19
HSERO
_RS10205
flagellar basal body rod protein FlgG
0.24
0.45
20
HSERO
_RS01985
energy transducer TonB
no
0.45
Or look for
negative cofitness