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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS22720 from
Herbaspirillum seropedicae SmR1
histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS22730
sugar ABC transporter substrate-binding protein
0.99
0.91
2
HSERO
_RS22725
transcriptional regulator
0.98
0.84
3
HSERO
_RS05195
xylose ABC transporter ATP-binding protein
no
0.84
4
HSERO
_RS05190
sugar ABC transporter substrate-binding protein
no
0.81
5
HSERO
_RS05200
ABC transporter permease
no
0.80
6
HSERO
_RS22470
D-xylose ABC transporter permease
no
0.76
7
HSERO
_RS22465
sugar ABC transporter
no
0.75
8
HSERO
_RS05215
LysR family transcriptional regulator
no
0.74
9
HSERO
_RS22455
AraC family transcriptional regulator
0.56
0.73
10
HSERO
_RS22460
xylose ABC transporter substrate-binding protein
no
0.72
11
HSERO
_RS15600
cytosol aminopeptidase
0.64
0.58
12
HSERO
_RS22485
amidohydrolase
no
0.47
13
HSERO
_RS05475
gluconokinase
no
0.46
14
HSERO
_RS22475
3-oxoacyl-ACP reductase
no
0.45
15
HSERO
_RS14670
phosphoenolpyruvate carboxylase
no
0.44
16
HSERO
_RS02630
membrane protein
no
0.43
17
HSERO
_RS21760
DSBA oxidoreductase
0.14
0.38
18
HSERO
_RS09150
transglycosylase
no
0.38
19
HSERO
_RS22480
dihydroxy-acid dehydratase
no
0.37
20
HSERO
_RS11065
quinolinate synthetase
0.35
0.36
Or look for
negative cofitness