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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS21595 from
Herbaspirillum seropedicae SmR1
type VI secretion protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS19035
hypothetical protein
no
0.35
2
HSERO
_RS05125
DeoR family transcripitonal regulator
no
0.34
3
HSERO
_RS10240
macrolide ABC transporter ATP-binding protein
no
0.34
4
HSERO
_RS19940
ABC transporter substrate-binding protein
no
0.32
5
HSERO
_RS20430
hypothetical protein
no
0.31
6
HSERO
_RS19595
glutamate synthase
no
0.31
7
HSERO
_RS21275
Asp/Glu racemase
no
0.31
8
HSERO
_RS07245
formate dehydrogenase
no
0.31
9
HSERO
_RS12830
branched-chain amino acid ABC transporter ATP-binding protein
no
0.30
10
HSERO
_RS15040
poly(R)-hydroxyalkanoic acid synthase
no
0.30
11
HSERO
_RS21600
hypothetical protein
no
0.29
12
HSERO
_RS09815
sodium:proton antiporter
no
0.29
13
HSERO
_RS15635
hypothetical protein
no
0.29
14
HSERO
_RS01380
hypothetical protein
no
0.29
15
HSERO
_RS22780
DEAD/DEAH box helicase
no
0.29
16
HSERO
_RS22785
Type I site-specific deoxyribonuclease specificity subunit
no
0.29
17
HSERO
_RS22790
type I restriction-modification protein subunit M
no
0.29
18
HSERO
_RS02690
taurine ABC transporter permease
no
0.29
19
HSERO
_RS14615
hypothetical protein
no
0.29
20
HSERO
_RS05100
sugar ABC transporter permease
no
0.29
Or look for
negative cofitness