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  • Top cofit genes for HSERO_RS21040 from Herbaspirillum seropedicae SmR1

    3-oxoacyl-ACP synthase
    SEED: 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180)
    KEGG: 3-oxoacyl-[acyl-carrier-protein] synthase III

    Rank Hit Name Description Conserved? Cofitness  
    1 HSERO_RS21010 LPS biosynthesis protein no 0.90
    2 HSERO_RS21005 asparagine synthase no 0.90
    3 HSERO_RS21060 hypothetical protein no 0.89
    4 HSERO_RS21055 hypothetical protein no 0.86
    5 HSERO_RS20970 NDP-N-acetyl-D-mannosaminuronate dehydrogenase no 0.85
    6 HSERO_RS20980 oxidoreductase no 0.85
    7 HSERO_RS21065 hypothetical protein no 0.84
    8 HSERO_RS21035 hypothetical protein no 0.83
    9 HSERO_RS21025 hypothetical protein no 0.82
    10 HSERO_RS21080 glycosyl transferase no 0.80
    11 HSERO_RS08530 glycine/betaine ABC transporter permease no 0.77
    12 HSERO_RS20990 aminotransferase DegT 0.58 0.77
    13 HSERO_RS08535 glycine/betaine ABC transporter substrate-binding protein no 0.75
    14 HSERO_RS23475 hydroxymethylglutaryl-CoA lyase no 0.72
    15 HSERO_RS12450 histidine kinase no 0.71
    16 HSERO_RS15435 enoyl-CoA hydratase no 0.71
    17 HSERO_RS21000 aminotransferase DegT 0.98 0.70
    18 HSERO_RS21380 MFS transporter no 0.70
    19 HSERO_RS04585 hypothetical protein no 0.69
    20 HSERO_RS03780 type VI secretion protein no 0.69

    Or look for negative cofitness