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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS21000 from
Herbaspirillum seropedicae SmR1
aminotransferase DegT
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS21005
asparagine synthase
no
0.76
2
HSERO
_RS21025
hypothetical protein
no
0.75
3
HSERO
_RS21065
hypothetical protein
no
0.74
4
HSERO
_RS21010
LPS biosynthesis protein
no
0.71
5
HSERO
_RS21040
3-oxoacyl-ACP synthase
0.98
0.70
6
HSERO
_RS14640
peptide chain release factor 3
0.97
0.70
7
HSERO
_RS21055
hypothetical protein
no
0.69
8
HSERO
_RS20970
NDP-N-acetyl-D-mannosaminuronate dehydrogenase
0.16
0.67
9
HSERO
_RS21035
hypothetical protein
no
0.67
10
HSERO
_RS21060
hypothetical protein
0.22
0.66
11
HSERO
_RS21080
glycosyl transferase
no
0.63
12
HSERO
_RS20975
UDP-galactose-4-epimerase
0.66
0.63
13
HSERO
_RS02015
peptidase M23
no
0.63
14
HSERO
_RS20980
oxidoreductase
no
0.61
15
HSERO
_RS21075
asparagine synthase
no
0.60
16
HSERO
_RS23475
hydroxymethylglutaryl-CoA lyase
0.68
0.59
17
HSERO
_RS20990
aminotransferase DegT
no
0.58
18
HSERO
_RS21380
MFS transporter
0.53
0.57
19
HSERO
_RS08290
leucine/isoleucine/valine transporter ATP-binding subunit
no
0.54
20
HSERO
_RS13960
hypothetical protein
no
0.54
Or look for
negative cofitness