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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS20600 from
Herbaspirillum seropedicae SmR1
transcription regulator protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02330
aspartate carbamoyltransferase
no
0.31
2
HSERO
_RS12105
RpiR family transcriptional regulator
0.61
0.31
3
HSERO
_RS11065
quinolinate synthetase
0.77
0.31
4
HSERO
_RS00730
4-hydroxybutyrate dehydrogenase
no
0.30
5
HSERO
_RS22485
amidohydrolase
no
0.29
6
HSERO
_RS17905
tRNA-dihydrouridine synthase A
no
0.29
7
HSERO
_RS11085
L-aspartate oxidase
no
0.28
8
HSERO
_RS21550
phosphoenolpyruvate carboxykinase
no
0.28
9
HSERO
_RS11070
nicotinate-nucleotide pyrophosphorylase
0.30
0.28
10
HSERO
_RS22480
dihydroxy-acid dehydratase
no
0.28
11
HSERO
_RS05715
amidohydrolase
no
0.28
12
HSERO
_RS00780
sugar transferase
no
0.28
13
HSERO
_RS22040
CDP-glucose 4,6-dehydratase
no
0.28
14
HSERO
_RS01990
shikimate 5-dehydrogenase
no
0.28
15
HSERO
_RS04290
DNA-binding protein
no
0.27
16
HSERO
_RS14615
hypothetical protein
no
0.26
17
HSERO
_RS19825
potassium transporter
no
0.25
18
HSERO
_RS01735
ATPase AAA
0.76
0.25
19
HSERO
_RS15565
sulfate adenylyltransferase subunit 2
0.84
0.25
20
HSERO
_RS08585
RNA methyltransferase
0.64
0.25
Or look for
negative cofitness