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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS19765 from
Herbaspirillum seropedicae SmR1
amino acid permease
SEED: Amino acid transporters
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS08260
hypothetical protein
no
0.32
2
HSERO
_RS12475
histidine kinase
no
0.31
3
HSERO
_RS21135
transcriptional regulator
no
0.30
4
HSERO
_RS18560
hypothetical protein
no
0.30
5
HSERO
_RS12990
aankyrin
no
0.30
6
HSERO
_RS03935
type III secretion protein
no
0.29
7
HSERO
_RS04845
ABC transporter
0.11
0.28
8
HSERO
_RS17370
hypothetical protein
no
0.28
9
HSERO
_RS05360
AraC family transcriptional regulator
no
0.28
10
HSERO
_RS06440
membrane protein
no
0.28
11
HSERO
_RS04855
ABC transporter permease
no
0.27
12
HSERO
_RS03655
ABC transporter substrate-binding protein
no
0.27
13
HSERO
_RS13940
acetylornithine deacetylase
no
0.27
14
HSERO
_RS18825
membrane protein
no
0.27
15
HSERO
_RS13550
diguanylate phosphodiesterase
no
0.27
16
HSERO
_RS11305
membrane protein
no
0.27
17
HSERO
_RS21170
5'-nucleotidase
no
0.26
18
HSERO
_RS20100
ABC transporter permease
no
0.26
19
HSERO
_RS21300
nitrate ABC transporter ATP-binding protein
no
0.26
20
HSERO
_RS12820
ABC transporter permease
no
0.26
Or look for
negative cofitness