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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS19480 from
Herbaspirillum seropedicae SmR1
membrane protein
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS12065
hypothetical protein
no
0.45
2
HSERO
_RS09530
hypothetical protein
no
0.39
3
HSERO
_RS09835
hypothetical protein
no
0.36
4
HSERO
_RS22365
lipid kinase
no
0.36
5
HSERO
_RS13470
C4-dicarboxylate ABC transporter
no
0.36
6
HSERO
_RS14020
LysR family transcriptional regulator
no
0.35
7
HSERO
_RS17835
NADPH-dependent FMN reductase
no
0.35
8
HSERO
_RS03965
hypothetical protein
no
0.35
9
HSERO
_RS12595
AraC family transcriptional regulator
no
0.35
10
HSERO
_RS02270
carboxymethylenebutenolidase
no
0.34
11
HSERO
_RS21115
flagellar motor protein
no
0.34
12
HSERO
_RS12835
long-chain fatty acid--CoA ligase
no
0.33
13
HSERO
_RS18280
anthranilate 1,2-dioxygenase small subunit
no
0.33
14
HSERO
_RS10840
cyanophycin synthetase
no
0.32
15
HSERO
_RS14320
FmdB family transcriptional regulator
no
0.32
16
HSERO
_RS13635
membrane protein
no
0.32
17
HSERO
_RS06390
hypothetical protein
no
0.31
18
HSERO
_RS21020
imidazole glycerol phosphate synthase
no
0.31
19
HSERO
_RS14150
RNA polymerase sigma factor
no
0.31
20
HSERO
_RS14585
hypothetical protein
no
0.31
Or look for
negative cofitness