• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for HSERO_RS19365 from Herbaspirillum seropedicae SmR1

    2-keto-3-deoxy-L-fuconate 4-dehydrogenase FucDH (from data)
    Original annotation: oxidoreductase
    SEED: 2-keto-3-deoxy-L-fuconate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 HSERO_RS05260 ABC transporter for L-fucose, substrate-binding component (from data) no 0.67
    2 HSERO_RS05250 ABC transporter for L-fucose, ATPase component (from data) no 0.59
    3 HSERO_RS05235 L-fuconate dehydratase (EC 4.2.1.68) (from data) 0.43 0.49
    4 HSERO_RS05240 short-chain dehydrogenase no 0.47
    5 HSERO_RS05255 ABC transporter for L-fucose, permease component (from data) no 0.36
    6 HSERO_RS03270 protein RecA 0.62 0.34
    7 HSERO_RS12480 membrane protein no 0.34
    8 HSERO_RS10325 flagellar biosynthesis protein no 0.33
    9 HSERO_RS06070 methyl-accepting chemotaxis protein no 0.33
    10 HSERO_RS17235 3-ketoacyl-ACP reductase no 0.31
    11 HSERO_RS18575 hydroxyquinol 1,2-dioxygenase no 0.30
    12 HSERO_RS08495 hypothetical protein no 0.29
    13 HSERO_RS07470 ketosteroid isomerase no 0.29
    14 HSERO_RS05265 L-fucono-1,5-lactonase (from data) 0.37 0.29
    15 HSERO_RS00805 preprotein translocase subunit SecB no 0.29
    16 HSERO_RS13565 MarR family transcriptional regulator no 0.28
    17 HSERO_RS21785 arogenate dehydratase 0.21 0.28
    18 HSERO_RS00305 arginase no 0.28
    19 HSERO_RS12330 hypothetical protein no 0.28
    20 HSERO_RS12050 AraC family transcriptional regulator no 0.28

    Or look for negative cofitness