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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS18690 from
Herbaspirillum seropedicae SmR1
short-chain dehydrogenase
KEGG:
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS17815
glycosyl transferase
no
0.27
2
HSERO
_RS01055
bacteriophage regulatory protein
no
0.27
3
HSERO
_RS19550
hypothetical protein
no
0.26
4
HSERO
_RS21410
NAD-dependent dehydratase
0.16
0.26
5
HSERO
_RS11400
exonuclease
0.55
0.25
6
HSERO
_RS05450
hypothetical protein
no
0.24
7
HSERO
_RS12680
MFS transporter
no
0.24
8
HSERO
_RS17810
glycosyl transferase
no
0.24
9
HSERO
_RS14835
peptidase M23
no
0.24
10
HSERO
_RS02090
Holliday junction DNA helicase RuvA
no
0.24
11
HSERO
_RS01530
3',5'-cyclic-nucleotide phosphodiesterase
no
0.24
12
HSERO
_RS02630
membrane protein
no
0.23
13
HSERO
_RS14405
molybdenum transport protein ModE
no
0.23
14
HSERO
_RS03045
HrcA family transcriptional regulator
no
0.22
15
HSERO
_RS11535
membrane protein
0.35
0.22
16
HSERO
_RS16885
magnesium-transporting ATPase
0.12
0.22
17
HSERO
_RS20905
hypothetical protein
no
0.22
18
HSERO
_RS13685
peptidase S1
no
0.22
19
HSERO
_RS08405
membrane protein
no
0.22
20
HSERO
_RS19775
acriflavine resistance protein B
no
0.22
Or look for
negative cofitness