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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS18645 from
Herbaspirillum seropedicae SmR1
chemotaxis protein CheY
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS22345
urea carboxylase
no
0.38
2
HSERO
_RS20275
lactate dehydrogenase
no
0.34
3
HSERO
_RS12615
nitrate ABC transporter substrate-binding protein
no
0.34
4
HSERO
_RS12550
D-lactate dehydrogenase
no
0.34
5
HSERO
_RS07610
fumarate hydratase
no
0.33
6
HSERO
_RS08585
RNA methyltransferase
no
0.33
7
HSERO
_RS01785
hypothetical protein
no
0.31
8
HSERO
_RS21190
hypothetical protein
0.24
0.31
9
HSERO
_RS15675
chemotaxis protein
no
0.30
10
HSERO
_RS14615
hypothetical protein
no
0.30
11
HSERO
_RS09150
transglycosylase
no
0.29
12
HSERO
_RS01955
methyl-accepting chemotaxis protein
no
0.29
13
HSERO
_RS03395
peptide methionine sulfoxide reductase
no
0.29
14
HSERO
_RS12530
transcriptional regulator
no
0.29
15
HSERO
_RS17230
transcriptional regulator
no
0.29
16
HSERO
_RS13135
phosphonoacetaldehyde hydrolase
0.30
0.29
17
HSERO
_RS09135
ABC transporter
no
0.29
18
HSERO
_RS02330
aspartate carbamoyltransferase
no
0.29
19
HSERO
_RS13680
methyl-accepting chemotaxis protein
no
0.29
20
HSERO
_RS06815
multidrug transporter
no
0.28
Or look for
negative cofitness