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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS18315 from
Herbaspirillum seropedicae SmR1
membrane protein
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS20060
metal-dependent hydrolase
no
0.26
2
HSERO
_RS01195
amino acid ABC transporter permease
no
0.25
3
HSERO
_RS14150
RNA polymerase sigma factor
no
0.24
4
HSERO
_RS16215
hypothetical protein
no
0.24
5
HSERO
_RS16990
transcriptional regulator
no
0.23
6
HSERO
_RS23830
transcriptional regulator
no
0.23
7
HSERO
_RS22780
DEAD/DEAH box helicase
no
0.23
8
HSERO
_RS04765
alkanesulfonate monooxygenase
no
0.23
9
HSERO
_RS20085
methyl-accepting chemotaxis protein
no
0.22
10
HSERO
_RS16740
GMC family oxidoreductase
0.45
0.22
11
HSERO
_RS23200
LysR family transcriptional regulator
no
0.22
12
HSERO
_RS06080
hypothetical protein
no
0.22
13
HSERO
_RS17460
oxidoreductase
no
0.21
14
HSERO
_RS23410
L-aspartate dehydrogenase
no
0.21
15
HSERO
_RS14610
hypothetical protein
no
0.21
16
HSERO
_RS11905
acyltransferase
no
0.21
17
HSERO
_RS10110
chemotaxis protein
no
0.21
18
HSERO
_RS13435
malonyl CoA-ACP transacylase
no
0.20
19
HSERO
_RS02560
hypothetical protein
no
0.20
20
HSERO
_RS11875
ATPase
no
0.20
Or look for
negative cofitness