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  • Top cofit genes for HSERO_RS17865 from Herbaspirillum seropedicae SmR1

    hypothetical protein
    SEED: FOG: TPR repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 HSERO_RS20710 peptidase M16 0.50 0.41
    2 HSERO_RS17870 glucokinase no 0.41
    3 HSERO_RS21420 5-formyltetrahydrofolate cyclo-ligase no 0.40
    4 HSERO_RS03905 RNA polymerase subunit sigma-24 no 0.39
    5 HSERO_RS16535 hypothetical protein no 0.38
    6 HSERO_RS07145 hypothetical protein no 0.38
    7 HSERO_RS23825 hypothetical protein no 0.38
    8 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase no 0.38
    9 HSERO_RS12440 universal stress protein no 0.37
    10 HSERO_RS05665 dehalogenase no 0.37
    11 HSERO_RS03725 type VI secretion protein no 0.36
    12 HSERO_RS02010 anhydro-N-acetylmuramic acid kinase no 0.35
    13 HSERO_RS15260 cell wall anchor protein no 0.35
    14 HSERO_RS03215 sodium:solute symporter no 0.35
    15 HSERO_RS02680 methyl-accepting chemotaxis protein no 0.35
    16 HSERO_RS13820 hypothetical protein no 0.35
    17 HSERO_RS10610 methylglyoxal synthase no 0.34
    18 HSERO_RS23020 amino acid ABC transporter no 0.34
    19 HSERO_RS06365 hypothetical protein no 0.34
    20 HSERO_RS11275 membrane protein no 0.34

    Or look for negative cofitness