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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS17645 from
Herbaspirillum seropedicae SmR1
TonB-denpendent receptor
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02620
cobalt transporter
no
0.46
2
HSERO
_RS16585
iron ABC transporter permease
no
0.44
3
HSERO
_RS17810
glycosyl transferase
no
0.43
4
HSERO
_RS21315
sugar ABC transporter permease
no
0.41
5
HSERO
_RS08405
membrane protein
no
0.41
6
HSERO
_RS17650
hypothetical protein
no
0.39
7
HSERO
_RS10675
diguanylate cyclase
no
0.38
8
HSERO
_RS13135
phosphonoacetaldehyde hydrolase
no
0.38
9
HSERO
_RS14415
Ler DNA-binding protein H-NS
no
0.38
10
HSERO
_RS16885
magnesium-transporting ATPase
no
0.38
11
HSERO
_RS00955
Tail fiber protein
no
0.38
12
HSERO
_RS21235
amino acid ABC transporter substrate-binding protein
no
0.37
13
HSERO
_RS06285
methyl-accepting chemotaxis protein
no
0.37
14
HSERO
_RS11570
cytochrome C oxidase
no
0.36
15
HSERO
_RS18840
enoyl-CoA hydratase
no
0.36
16
HSERO
_RS17815
glycosyl transferase
no
0.36
17
HSERO
_RS16435
LOG family protein
no
0.36
18
HSERO
_RS21845
transcription regulator protein
no
0.35
19
HSERO
_RS03955
ATP synthase
no
0.35
20
HSERO
_RS02635
LysR family transcriptional regulator
no
0.35
Or look for
negative cofitness