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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS17465 from
Herbaspirillum seropedicae SmR1
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS20630
phenylacetic acid degradation protein
0.37
0.42
2
HSERO
_RS02015
peptidase M23
no
0.33
3
HSERO
_RS20995
NAD dependent epimerase/dehydratase
no
0.32
4
HSERO
_RS06835
MerR family transcriptional regulator
no
0.32
5
HSERO
_RS02455
UDP pyrophosphate phosphatase
no
0.31
6
HSERO
_RS22305
oxidoreductase
no
0.30
7
HSERO
_RS21000
aminotransferase DegT
no
0.30
8
HSERO
_RS23475
hydroxymethylglutaryl-CoA lyase
no
0.29
9
HSERO
_RS21040
3-oxoacyl-ACP synthase
no
0.29
10
HSERO
_RS02855
D-aminoacylase
no
0.29
11
HSERO
_RS14320
FmdB family transcriptional regulator
no
0.29
12
HSERO
_RS11695
rhodanese
no
0.29
13
HSERO
_RS21530
cytochrome C550
no
0.29
14
HSERO
_RS21065
hypothetical protein
no
0.29
15
HSERO
_RS11760
hypothetical protein
no
0.29
16
HSERO
_RS21010
LPS biosynthesis protein
no
0.28
17
HSERO
_RS13465
malonate decarboxylase subunit alpha
no
0.28
18
HSERO
_RS20975
UDP-galactose-4-epimerase
no
0.28
19
HSERO
_RS20640
enoyl-CoA hydratase
no
0.28
20
HSERO
_RS09760
hypothetical protein
no
0.28
Or look for
negative cofitness