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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS17190 from
Herbaspirillum seropedicae SmR1
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS12850
LuxR family transcriptional regulator
no
0.33
2
HSERO
_RS06240
hypothetical protein
no
0.31
3
HSERO
_RS23485
2-nitropropane dioxygenase
no
0.31
4
HSERO
_RS13075
transcriptional regulator
no
0.30
5
HSERO
_RS19820
methyl-accepting chemotaxis protein
no
0.30
6
HSERO
_RS11215
methionine sulfoxide reductase B
no
0.28
7
HSERO
_RS16450
colicin V production protein
no
0.27
8
HSERO
_RS17195
chemotaxis protein
no
0.27
9
HSERO
_RS12225
AraC family transcriptional regulator
no
0.27
10
HSERO
_RS05075
diguanylate cyclase
no
0.27
11
HSERO
_RS16120
hypothetical protein
no
0.27
12
HSERO
_RS02135
phosphomethylpyrimidine kinase
no
0.26
13
HSERO
_RS08950
spermidine synthase
no
0.26
14
HSERO
_RS05310
AraC family transcriptional regulator
no
0.26
15
HSERO
_RS02795
alcohol dehydrogenase
no
0.26
16
HSERO
_RS12660
pirin
no
0.25
17
HSERO
_RS02250
hypothetical protein
no
0.25
18
HSERO
_RS06465
cell envelope biogenesis protein OmpA
no
0.25
19
HSERO
_RS06405
MFS transporter
no
0.25
20
HSERO
_RS01030
tail-like protein
no
0.25
Or look for
negative cofitness