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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS16990 from
Herbaspirillum seropedicae SmR1
transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS16840
competence damage-inducible protein A
no
0.48
2
HSERO
_RS02130
thiazole synthase
no
0.42
3
HSERO
_RS13650
high-affinity Fe2+/Pb2+ permease
no
0.41
4
HSERO
_RS13660
membrane protein
no
0.41
5
HSERO
_RS21540
alkyl hydroperoxide reductase subunit C
0.40
0.41
6
HSERO
_RS00835
molybdopterin biosynthesis protein MoeB
no
0.40
7
HSERO
_RS02120
phosphomethylpyrimidine synthase ThiC
no
0.40
8
HSERO
_RS02125
thiamine biosynthesis protein ThiS
no
0.38
9
HSERO
_RS02135
phosphomethylpyrimidine kinase
no
0.37
10
HSERO
_RS04135
amidohydrolase
0.54
0.37
11
HSERO
_RS17460
oxidoreductase
no
0.37
12
HSERO
_RS02805
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
no
0.36
13
HSERO
_RS14935
hypothetical protein
no
0.36
14
HSERO
_RS07945
chloride channel protein
0.33
0.36
15
HSERO
_RS13655
hypothetical protein
no
0.36
16
HSERO
_RS00965
trehalose-phosphatase
no
0.35
17
HSERO
_RS22770
LysR family transcriptional regulator
0.46
0.35
18
HSERO
_RS16995
sensor histidine kinase
0.44
0.34
19
HSERO
_RS14410
lactoylglutathione lyase
no
0.34
20
HSERO
_RS02205
phosphatase
no
0.34
Or look for
negative cofitness