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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS16435 from
Herbaspirillum seropedicae SmR1
LOG family protein
SEED: Lysine decarboxylase family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS01255
acyl-CoA dehydrogenase
0.29
0.41
2
HSERO
_RS08405
membrane protein
no
0.38
3
HSERO
_RS09415
ribosomal large subunit pseudouridine synthase C
no
0.38
4
HSERO
_RS17645
TonB-denpendent receptor
no
0.36
5
HSERO
_RS17810
glycosyl transferase
no
0.36
6
HSERO
_RS16585
iron ABC transporter permease
0.59
0.36
7
HSERO
_RS11435
IclR family transcriptional regulator
no
0.35
8
HSERO
_RS15630
exodeoxyribonuclease III
no
0.34
9
HSERO
_RS17170
mammalian cell entry protein
no
0.33
10
HSERO
_RS09500
cell division protein FtsK
0.45
0.33
11
HSERO
_RS19630
AMP nucleosidase
0.78
0.33
12
HSERO
_RS01295
deoxyuridine 5'-triphosphate nucleotidohydrolase
no
0.33
13
HSERO
_RS16885
magnesium-transporting ATPase
no
0.32
14
HSERO
_RS08320
amino acid ABC transporter substrate-binding protein
no
0.32
15
HSERO
_RS21895
TonB-dependent receptor
no
0.32
16
HSERO
_RS02260
DNA polymerase I
no
0.32
17
HSERO
_RS14415
Ler DNA-binding protein H-NS
no
0.32
18
HSERO
_RS16545
membrane protein
no
0.32
19
HSERO
_RS02410
acriflavine resistance protein B
0.42
0.32
20
HSERO
_RS02415
hemolysin D
0.40
0.31
Or look for
negative cofitness