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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS16175 from
Herbaspirillum seropedicae SmR1
peptidase
SEED: FIG00458225: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02930
cupin
no
0.35
2
HSERO
_RS18580
LysR family transcriptional regulator
no
0.34
3
HSERO
_RS14450
membrane protein
no
0.34
4
HSERO
_RS03735
type VI secretion protein
no
0.33
5
HSERO
_RS04635
acetyl-CoA acetyltransferase
no
0.33
6
HSERO
_RS04065
pilus biosynthesis protein PilS
no
0.31
7
HSERO
_RS01115
integrase
no
0.31
8
HSERO
_RS06515
ATPase AAA
no
0.31
9
HSERO
_RS08435
hypothetical protein
no
0.31
10
HSERO
_RS18740
hypothetical protein
no
0.31
11
HSERO
_RS15215
membrane protein
no
0.30
12
HSERO
_RS00100
type VI secretion protein
no
0.30
13
HSERO
_RS21575
transcriptional regulator
0.16
0.30
14
HSERO
_RS05455
gamma-glutamyltranspeptidase
0.29
0.30
15
HSERO
_RS20705
cobyrinic acid a,c-diamide synthase
no
0.30
16
HSERO
_RS00535
TonB-dependent receptor
no
0.29
17
HSERO
_RS02565
nucleotide pyrophosphohydrolase
no
0.28
18
HSERO
_RS03600
chemotaxis protein
no
0.28
19
HSERO
_RS16310
hydroxydechloroatrazine ethylaminohydrolase
no
0.28
20
HSERO
_RS16610
transcriptional regulator
no
0.28
Or look for
negative cofitness