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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS15750 from
Herbaspirillum seropedicae SmR1
lysine transporter LysE
SEED: L-lysine permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS14570
DNA-binding protein
no
0.50
2
HSERO
_RS09730
glycoside hydrolase family 43
no
0.50
3
HSERO
_RS09735
hypothetical protein
no
0.49
4
HSERO
_RS21530
cytochrome C550
no
0.49
5
HSERO
_RS19785
sensor histidine kinase
0.38
0.49
6
HSERO
_RS12300
hypothetical protein
no
0.49
7
HSERO
_RS17395
hypothetical protein
no
0.48
8
HSERO
_RS09725
ABC transporter
no
0.48
9
HSERO
_RS09720
membrane protein
no
0.48
10
HSERO
_RS08105
sodium:proton antiporter
0.62
0.47
11
HSERO
_RS21075
asparagine synthase
no
0.47
12
HSERO
_RS19805
glycosyl transferase
no
0.47
13
HSERO
_RS11770
hypothetical protein
no
0.46
14
HSERO
_RS08530
glycine/betaine ABC transporter permease
0.37
0.46
15
HSERO
_RS08535
glycine/betaine ABC transporter substrate-binding protein
no
0.46
16
HSERO
_RS21065
hypothetical protein
no
0.45
17
HSERO
_RS15435
enoyl-CoA hydratase
0.18
0.45
18
HSERO
_RS17410
hypothetical protein
no
0.45
19
HSERO
_RS21080
glycosyl transferase
no
0.45
20
HSERO
_RS17530
RpiR family transcriptional regulator
no
0.45
Or look for
negative cofitness