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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS15700 from
Herbaspirillum seropedicae SmR1
histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS17910
hypothetical protein
no
0.37
2
HSERO
_RS08990
heat shock protein 90
no
0.33
3
HSERO
_RS10785
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
no
0.33
4
HSERO
_RS11960
hypothetical protein
no
0.33
5
HSERO
_RS10070
hypothetical protein
no
0.32
6
HSERO
_RS12500
malto-oligosyltrehalose trehalohydrolase
no
0.32
7
HSERO
_RS22400
Fe2+-dicitrate sensor membrane protein
no
0.32
8
HSERO
_RS23130
major facilitator transporter
no
0.31
9
HSERO
_RS08170
S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB
no
0.31
10
HSERO
_RS12700
sphingosine kinase
no
0.30
11
HSERO
_RS07105
allophanate hydrolase
no
0.30
12
HSERO
_RS10810
membrane protein
no
0.29
13
HSERO
_RS01770
general secretion pathway protein GspE
no
0.29
14
HSERO
_RS13875
O-antigen polymerase
no
0.29
15
HSERO
_RS05820
IclR family transcriptional regulator
no
0.29
16
HSERO
_RS05320
ribonucleotide-diphosphate reductase subunit alpha
no
0.28
17
HSERO
_RS15400
ABC transporter permease
no
0.28
18
HSERO
_RS07150
apolipoprotein acyltransferase
no
0.28
19
HSERO
_RS18150
hypothetical protein
no
0.28
20
HSERO
_RS19320
hypothetical protein
no
0.28
Or look for
negative cofitness