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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS15615 from
Herbaspirillum seropedicae SmR1
membrane protein
KEGG: outer membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS04940
TonB-denpendent receptor
no
0.39
2
HSERO
_RS07025
ATP-dependent Clp protease ClpS
no
0.37
3
HSERO
_RS04775
ABC transporter permease
no
0.35
4
HSERO
_RS10870
methionine aminopeptidase
no
0.35
5
HSERO
_RS02365
hypothetical protein
no
0.34
6
HSERO
_RS01825
RNA pyrophosphohydrolase
no
0.33
7
HSERO
_RS21480
transcriptional regulator
no
0.32
8
HSERO
_RS11035
7-cyano-7-deazaguanine reductase
no
0.32
9
HSERO
_RS21115
flagellar motor protein
no
0.32
10
HSERO
_RS08985
hypothetical protein
no
0.31
11
HSERO
_RS15070
ribosomal large subunit pseudouridine synthase D
no
0.30
12
HSERO
_RS08770
membrane protein
no
0.30
13
HSERO
_RS10665
coproporphyrinogen III oxidase
no
0.30
14
HSERO
_RS05630
AsnC family transcriptional regulator
no
0.30
15
HSERO
_RS08115
acyl-CoA-binding protein
no
0.29
16
HSERO
_RS20995
NAD dependent epimerase/dehydratase
no
0.29
17
HSERO
_RS21540
alkyl hydroperoxide reductase subunit C
no
0.29
18
HSERO
_RS12835
long-chain fatty acid--CoA ligase
0.33
0.29
19
HSERO
_RS22330
hypothetical protein
no
0.29
20
HSERO
_RS17925
acetyltransferase
no
0.29
Or look for
negative cofitness