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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS15545 from
Herbaspirillum seropedicae SmR1
membrane protein
SEED: Putative sulfate permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS00455
homoserine O-acetyltransferase
0.89
0.66
2
HSERO
_RS16505
3-isopropylmalate dehydratase small subunit
0.81
0.65
3
HSERO
_RS16440
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
(from data)
0.79
0.65
4
HSERO
_RS16515
isopropylmalate isomerase
0.81
0.63
5
HSERO
_RS02650
dihydroxy-acid dehydratase
0.72
0.62
6
HSERO
_RS19595
glutamate synthase
0.82
0.62
7
HSERO
_RS15555
oxidoreductase
0.89
0.62
8
HSERO
_RS01935
3-dehydroquinate dehydratase
0.77
0.61
9
HSERO
_RS16500
3-isopropylmalate dehydrogenase
0.81
0.61
10
HSERO
_RS08650
acetolactate synthase
0.69
0.61
11
HSERO
_RS17185
2-isopropylmalate synthase
0.68
0.61
12
HSERO
_RS18430
chorismate mutase
0.90
0.61
13
HSERO
_RS19435
anthranilate synthase subunit I
0.86
0.59
14
HSERO
_RS20345
histidinol dehydrogenase
0.39
0.59
15
HSERO
_RS19450
indole-3-glycerol-phosphate synthase
0.84
0.59
16
HSERO
_RS01990
shikimate 5-dehydrogenase
0.78
0.59
17
HSERO
_RS18990
pyrroline-5-carboxylate reductase
0.32
0.59
18
HSERO
_RS20350
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
0.38
0.59
19
HSERO
_RS15550
sulfite reductase
0.88
0.58
20
HSERO
_RS19445
anthranilate phosphoribosyltransferase
0.80
0.58
Or look for
negative cofitness