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  • Top cofit genes for HSERO_RS15300 from Herbaspirillum seropedicae SmR1

    methionine sulfoxide reductase A
    SEED: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
    KEGG: peptide-methionine (S)-S-oxide reductase

    Rank Hit Name Description Conserved? Cofitness  
    1 HSERO_RS23070 transcriptional regulator no 0.39
    2 HSERO_RS06760 hypothetical protein no 0.38
    3 HSERO_RS13195 ATPase no 0.36
    4 HSERO_RS02620 cobalt transporter no 0.34
    5 HSERO_RS22275 2-pyrone-4,6-dicarboxylate hydrolase no 0.34
    6 HSERO_RS09300 serine O-acetyltransferase no 0.33
    7 HSERO_RS22490 diguanylate cyclase no 0.33
    8 HSERO_RS06245 catalase-peroxidase 0.36 0.33
    9 HSERO_RS00800 hypothetical protein no 0.32
    10 HSERO_RS22345 urea carboxylase no 0.32
    11 HSERO_RS06665 diguanylate cyclase no 0.32
    12 HSERO_RS20330 imidazoleglycerol-phosphate dehydratase no 0.32
    13 HSERO_RS02645 MFS transporter no 0.32
    14 HSERO_RS18710 hypothetical protein 0.36 0.32
    15 HSERO_RS20315 imidazole glycerol phosphate synthase 0.36 0.32
    16 HSERO_RS20935 hypothetical protein no 0.32
    17 HSERO_RS02650 dihydroxy-acid dehydratase 0.38 0.32
    18 HSERO_RS07660 RND transporter no 0.32
    19 HSERO_RS15565 sulfate adenylyltransferase subunit 2 0.33 0.31
    20 HSERO_RS08650 acetolactate synthase no 0.31

    Or look for negative cofitness