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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS13220 from
Herbaspirillum seropedicae SmR1
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS16440
O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
(from data)
no
0.33
2
HSERO
_RS19595
glutamate synthase
no
0.32
3
HSERO
_RS00455
homoserine O-acetyltransferase
no
0.32
4
HSERO
_RS16505
3-isopropylmalate dehydratase small subunit
no
0.31
5
HSERO
_RS04125
LysR family transcriptional regulator
no
0.31
6
HSERO
_RS17665
hypothetical protein
no
0.30
7
HSERO
_RS19985
ABC transporter permease
no
0.30
8
HSERO
_RS02650
dihydroxy-acid dehydratase
no
0.30
9
HSERO
_RS12855
histidine kinase
no
0.30
10
HSERO
_RS18425
prephenate dehydrogenase
no
0.29
11
HSERO
_RS16480
N-(5'-phosphoribosyl)anthranilate isomerase
no
0.29
12
HSERO
_RS16500
3-isopropylmalate dehydrogenase
no
0.29
13
HSERO
_RS07400
LysR family transcriptional regulator
no
0.29
14
HSERO
_RS17185
2-isopropylmalate synthase
no
0.29
15
HSERO
_RS19450
indole-3-glycerol-phosphate synthase
no
0.29
16
HSERO
_RS20920
3-dehydroquinate synthase
no
0.28
17
HSERO
_RS16515
isopropylmalate isomerase
no
0.28
18
HSERO
_RS11065
quinolinate synthetase
no
0.28
19
HSERO
_RS01480
heat-shock protein
no
0.28
20
HSERO
_RS08650
acetolactate synthase
no
0.28
Or look for
negative cofitness