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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS12395 from
Herbaspirillum seropedicae SmR1
TetR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS13930
competence protein ComEC
no
0.66
2
HSERO
_RS13935
DNAase
no
0.53
3
HSERO
_RS13620
diguanylate cyclase
no
0.50
4
HSERO
_RS20810
amidophosphoribosyltransferase
no
0.46
5
HSERO
_RS23505
transcriptional regulator
no
0.45
6
HSERO
_RS04290
DNA-binding protein
no
0.44
7
HSERO
_RS01295
deoxyuridine 5'-triphosphate nucleotidohydrolase
no
0.42
8
HSERO
_RS22785
Type I site-specific deoxyribonuclease specificity subunit
no
0.39
9
HSERO
_RS12850
LuxR family transcriptional regulator
no
0.39
10
HSERO
_RS12860
histidine kinase
no
0.39
11
HSERO
_RS09660
ribonuclease III
no
0.37
12
HSERO
_RS11235
branched-chain amino acid ABC transporter substrate-binding protein
no
0.36
13
HSERO
_RS02425
transcriptional activator
no
0.34
14
HSERO
_RS19285
long-chain fatty acid--CoA ligase
no
0.34
15
HSERO
_RS21230
GntR family transcriptional regulator
no
0.33
16
HSERO
_RS20865
ABC transporter permease
no
0.33
17
HSERO
_RS01520
hemagglutinin
no
0.32
18
HSERO
_RS11490
D-ribose ABC transporter, permease component RbsC
(from data)
no
0.31
19
HSERO
_RS00780
sugar transferase
no
0.30
20
HSERO
_RS09845
alpha/beta hydrolase
no
0.30
Or look for
negative cofitness