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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS12215 from
Herbaspirillum seropedicae SmR1
alpha/beta hydrolase superfamily protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS16190
hypothetical protein
no
0.37
2
HSERO
_RS12030
phosphate acetyl/butaryl transferase
no
0.37
3
HSERO
_RS10670
signal transduction protein
no
0.34
4
HSERO
_RS03310
hypothetical protein
no
0.34
5
HSERO
_RS13700
Fis family transcriptional regulator
no
0.34
6
HSERO
_RS12630
chemotaxis protein CheY
no
0.34
7
HSERO
_RS17615
glycosyl hydrolase
no
0.33
8
HSERO
_RS08280
leucine/isoleucine/valine transporter permease subunit
no
0.32
9
HSERO
_RS05205
L-arabonate dehydratase (EC 4.2.1.25)
(from data)
no
0.32
10
HSERO
_RS01380
hypothetical protein
no
0.31
11
HSERO
_RS18255
branched-chain amino acid ABC transporter substrate-binding protein
no
0.31
12
HSERO
_RS05710
aldehyde dehydrogenase
no
0.31
13
HSERO
_RS10330
flagellar hook-length control protein FliK
no
0.31
14
HSERO
_RS11825
hypothetical protein
no
0.31
15
HSERO
_RS06875
LysR family transcriptional regulator
no
0.31
16
HSERO
_RS05815
osmotically inducible protein C
no
0.31
17
HSERO
_RS05210
L-arabinose 1-dehydrogenase (EC 1.1.1.46)
(from data)
no
0.30
18
HSERO
_RS11625
dioxygenase
0.23
0.30
19
HSERO
_RS04065
pilus biosynthesis protein PilS
no
0.30
20
HSERO
_RS06780
ABC transporter permease
no
0.29
Or look for
negative cofitness