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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS10085 from
Herbaspirillum seropedicae SmR1
transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS01125
bacteriophage transcription regulator protein
no
0.37
2
HSERO
_RS20765
membrane protein
no
0.37
3
HSERO
_RS21485
phosphoglycolate phosphatase
no
0.35
4
HSERO
_RS18650
histidine kinase
no
0.34
5
HSERO
_RS04745
ligand-gated channel protein
no
0.30
6
HSERO
_RS09170
MFS transporter
no
0.30
7
HSERO
_RS16805
hypothetical protein
no
0.30
8
HSERO
_RS11385
DEAD/DEAH box helicase
no
0.30
9
HSERO
_RS16975
mannosyltransferase
no
0.28
10
HSERO
_RS04775
ABC transporter permease
no
0.28
11
HSERO
_RS16580
glutathione reductase
no
0.28
12
HSERO
_RS13145
histidine kinase
no
0.28
13
HSERO
_RS13820
hypothetical protein
no
0.28
14
HSERO
_RS11360
DNA ligase
no
0.28
15
HSERO
_RS05770
benzoylformate decarboxylase
no
0.28
16
HSERO
_RS15870
metal ABC transporter substrate-binding protein
no
0.28
17
HSERO
_RS15240
XRE family transcriptional regulator
no
0.28
18
HSERO
_RS13825
hypothetical protein
no
0.28
19
HSERO
_RS17675
alpha/beta hydrolase
no
0.28
20
HSERO
_RS03175
hypothetical protein
no
0.27
Or look for
negative cofitness