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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS09170 from
Herbaspirillum seropedicae SmR1
MFS transporter
SEED: Nitrate/nitrite transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS20345
histidinol dehydrogenase
no
0.45
2
HSERO
_RS16805
hypothetical protein
no
0.44
3
HSERO
_RS20330
imidazoleglycerol-phosphate dehydratase
no
0.44
4
HSERO
_RS17815
glycosyl transferase
no
0.43
5
HSERO
_RS18430
chorismate mutase
no
0.43
6
HSERO
_RS15260
cell wall anchor protein
no
0.43
7
HSERO
_RS20320
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
(from data)
no
0.42
8
HSERO
_RS20355
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
no
0.42
9
HSERO
_RS07665
anthranilate synthase
no
0.42
10
HSERO
_RS20310
phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)
(from data)
no
0.42
11
HSERO
_RS01990
shikimate 5-dehydrogenase
no
0.41
12
HSERO
_RS18650
histidine kinase
no
0.41
13
HSERO
_RS19510
threonine dehydratase
no
0.41
14
HSERO
_RS16515
isopropylmalate isomerase
no
0.41
15
HSERO
_RS15550
sulfite reductase
0.24
0.41
16
HSERO
_RS16505
3-isopropylmalate dehydratase small subunit
no
0.41
17
HSERO
_RS16500
3-isopropylmalate dehydrogenase
no
0.41
18
HSERO
_RS12590
ethanolamin permease
no
0.41
19
HSERO
_RS20350
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
no
0.41
20
HSERO
_RS15380
GntR family transcriptional regulator
no
0.40
Or look for
negative cofitness