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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS08685 from
Herbaspirillum seropedicae SmR1
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS21875
endoribonuclease L-PSP
no
0.39
2
HSERO
_RS04870
glycerol ABC transporter, substrate-binding component
(from data)
no
0.34
3
HSERO
_RS23820
MarR family transcriptional regulator
no
0.32
4
HSERO
_RS16000
AsnC family transcriptional regulator
no
0.31
5
HSERO
_RS09470
acetaldehyde dehydrogenase
no
0.31
6
HSERO
_RS12925
catabolite repression CreA protein
no
0.31
7
HSERO
_RS06525
3-oxoadipate enol-lactonase
no
0.30
8
HSERO
_RS06685
MFS transporter
no
0.30
9
HSERO
_RS01115
integrase
no
0.30
10
HSERO
_RS18825
membrane protein
no
0.30
11
HSERO
_RS21135
transcriptional regulator
no
0.29
12
HSERO
_RS08260
hypothetical protein
no
0.29
13
HSERO
_RS20900
type IV pilus biogenesis protein
no
0.28
14
HSERO
_RS21910
iron ABC transporter ATP-binding protein
no
0.28
15
HSERO
_RS21785
arogenate dehydratase
no
0.28
16
HSERO
_RS05135
ABC transporter permease
no
0.28
17
HSERO
_RS08275
branched-chain amino acid transporter permease subunit LivH
no
0.27
18
HSERO
_RS19890
histidine kinase
no
0.27
19
HSERO
_RS22315
hypothetical protein
no
0.27
20
HSERO
_RS18630
hemerythrin
no
0.26
Or look for
negative cofitness