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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS08320 from
Herbaspirillum seropedicae SmR1
amino acid ABC transporter substrate-binding protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS10675
diguanylate cyclase
no
0.57
2
HSERO
_RS23840
hypothetical protein
no
0.57
3
HSERO
_RS01295
deoxyuridine 5'-triphosphate nucleotidohydrolase
no
0.54
4
HSERO
_RS12780
diguanylate phosphodiesterase
no
0.50
5
HSERO
_RS03110
chemotaxis protein CheA
no
0.49
6
HSERO
_RS03105
anti-sigma factor antagonist
no
0.48
7
HSERO
_RS04290
DNA-binding protein
no
0.47
8
HSERO
_RS01520
hemagglutinin
no
0.47
9
HSERO
_RS04880
phosphodiesterase
no
0.45
10
HSERO
_RS13110
chemotaxis protein
no
0.43
11
HSERO
_RS10600
diguanylate phosphodiesterase
no
0.43
12
HSERO
_RS14415
Ler DNA-binding protein H-NS
no
0.39
13
HSERO
_RS13620
diguanylate cyclase
no
0.38
14
HSERO
_RS05515
glucose-6-phosphate isomerase
no
0.37
15
HSERO
_RS01525
hypothetical protein
no
0.37
16
HSERO
_RS08495
hypothetical protein
no
0.36
17
HSERO
_RS11235
branched-chain amino acid ABC transporter substrate-binding protein
no
0.35
18
HSERO
_RS06290
methyl-accepting chemotaxis protein
no
0.35
19
HSERO
_RS23845
ATP-binding protein
0.36
0.33
20
HSERO
_RS06880
transcriptional regulator
no
0.33
Or look for
negative cofitness