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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS07985 from
Herbaspirillum seropedicae SmR1
copper oxidase
SEED: Multicopper oxidase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS00425
ammonia channel protein
no
0.44
2
HSERO
_RS00415
hypothetical protein
no
0.44
3
HSERO
_RS04945
murein transglycosylase
no
0.42
4
HSERO
_RS13885
histidine kinase
no
0.40
5
HSERO
_RS15790
chemotaxis protein
no
0.40
6
HSERO
_RS10280
flagellar basal body protein FliL
no
0.40
7
HSERO
_RS10115
chemotaxis protein CheR
0.28
0.40
8
HSERO
_RS10125
chemotaxis protein
no
0.40
9
HSERO
_RS02615
polymerase
no
0.39
10
HSERO
_RS05855
flagellar motor protein MotA
no
0.39
11
HSERO
_RS10315
flagellar hook-basal body protein FliE
no
0.39
12
HSERO
_RS10305
flagellar motor switch protein FliG
0.36
0.39
13
HSERO
_RS14970
flagellar motor protein MotB
no
0.38
14
HSERO
_RS13890
LuxR family transcriptional regulator
0.42
0.38
15
HSERO
_RS10275
flagellar motor switch protein FliM
0.34
0.38
16
HSERO
_RS15535
chemotaxis protein CheA
no
0.37
17
HSERO
_RS11405
transcriptional regulator
no
0.37
18
HSERO
_RS10215
flagellar P-ring protein FlgI
0.39
0.37
19
HSERO
_RS16040
cytochrome CBB3
no
0.37
20
HSERO
_RS09005
type I secretion protein HlyD
no
0.37
Or look for
negative cofitness