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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS07710 from
Herbaspirillum seropedicae SmR1
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS06550
benzoate 1,2-dioxygenase subunit alpha
no
0.29
2
HSERO
_RS16315
adenine permease
no
0.28
3
HSERO
_RS04895
AraC family transcriptional regulator
no
0.27
4
HSERO
_RS15060
LysR family transcriptional regulator
no
0.25
5
HSERO
_RS23915
methyl-accepting chemotaxis protein
no
0.24
6
HSERO
_RS03665
oxidoreductase
no
0.24
7
HSERO
_RS08555
agmatinase
no
0.24
8
HSERO
_RS08310
choline dehydrogenase
no
0.24
9
HSERO
_RS11705
extracytoplasmic-function sigma-70 factor
no
0.23
10
HSERO
_RS20530
porin
no
0.23
11
HSERO
_RS20675
diguanylate cyclase
no
0.23
12
HSERO
_RS07080
ABC transporter ATP-binding protein
no
0.23
13
HSERO
_RS02795
alcohol dehydrogenase
no
0.22
14
HSERO
_RS18940
sn-glycerol-3-phosphate ABC transporter ATP-binding protein
no
0.22
15
HSERO
_RS13140
poly(3-hydroxyalkanoate) synthetase
no
0.22
16
HSERO
_RS11955
stress protein
no
0.22
17
HSERO
_RS12225
AraC family transcriptional regulator
no
0.22
18
HSERO
_RS12420
transcriptional regulator
no
0.22
19
HSERO
_RS14475
iron ABC transporter ATP-binding protein
no
0.21
20
HSERO
_RS08800
NAD(P)H quinone oxidoreductase
no
0.21
Or look for
negative cofitness