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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS07075 from
Herbaspirillum seropedicae SmR1
cysteine hydrolase
SEED: Isochorismatase (EC 3.3.2.1)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS07105
allophanate hydrolase
no
0.42
2
HSERO
_RS02045
toxin HipA
no
0.35
3
HSERO
_RS15260
cell wall anchor protein
no
0.34
4
HSERO
_RS02925
3-oxoacyl-ACP reductase
no
0.34
5
HSERO
_RS21500
hypothetical protein
no
0.33
6
HSERO
_RS07745
glutathione S-transferase
0.25
0.32
7
HSERO
_RS17910
hypothetical protein
no
0.32
8
HSERO
_RS19730
short-chain dehydrogenase
no
0.31
9
HSERO
_RS16570
membrane protein
no
0.31
10
HSERO
_RS04040
pilus assembly protein
0.36
0.30
11
HSERO
_RS20675
diguanylate cyclase
0.46
0.30
12
HSERO
_RS17820
Lipid A core--O-antigen ligase
no
0.30
13
HSERO
_RS19725
glycosyl hydrolase
no
0.30
14
HSERO
_RS00850
TonB-dependent receptor
no
0.29
15
HSERO
_RS11160
glutamine amidotransferase
no
0.29
16
HSERO
_RS08015
MerR family transcriptional regulator
no
0.29
17
HSERO
_RS23165
MFS transporter
no
0.29
18
HSERO
_RS09475
Fis family transcriptional regulator
no
0.29
19
HSERO
_RS11655
hemerythrin
no
0.28
20
HSERO
_RS23715
hypothetical protein
no
0.28
Or look for
negative cofitness