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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS05985 from
Herbaspirillum seropedicae SmR1
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS13575
DSBA oxidoreductase
no
0.26
2
HSERO
_RS07340
LysR family transcriptional regulator
no
0.25
3
HSERO
_RS17485
transcription regulator protein
no
0.25
4
HSERO
_RS22395
RNA polymerase sigma factor
no
0.24
5
HSERO
_RS20530
porin
no
0.24
6
HSERO
_RS16915
chemotaxis protein CheY
no
0.24
7
HSERO
_RS02990
ABC transporter substrate-binding protein
no
0.23
8
HSERO
_RS19225
peroxiredoxin
no
0.23
9
HSERO
_RS17165
hypothetical protein
no
0.23
10
HSERO
_RS03660
diguanylate cyclase
no
0.23
11
HSERO
_RS01340
sugar ABC transporter permease
no
0.23
12
HSERO
_RS11740
esterase
no
0.22
13
HSERO
_RS05070
UDP-glucose 4-epimerase
no
0.22
14
HSERO
_RS01365
TetR family transcriptional regulator
no
0.22
15
HSERO
_RS21405
glutathione S-transferase
no
0.22
16
HSERO
_RS08725
transcriptional regulator
no
0.22
17
HSERO
_RS22530
membrane protein
no
0.22
18
HSERO
_RS01380
hypothetical protein
no
0.21
19
HSERO
_RS04205
membrane protein
no
0.21
20
HSERO
_RS15980
DSBA oxidoreductase
no
0.21
Or look for
negative cofitness