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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS05620 from
Herbaspirillum seropedicae SmR1
dehydratase
SEED: Acyl dehydratase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS12795
hypothetical protein
no
0.35
2
HSERO
_RS18955
glycerol-3-phosphate ABC transporter substrate-binding protein
no
0.34
3
HSERO
_RS04075
type IV prepilin PilV protein
no
0.34
4
HSERO
_RS21620
amino acid ABC transporter permease
no
0.33
5
HSERO
_RS02590
DeoR faimly transcriptional regulator
no
0.33
6
HSERO
_RS05580
cardiolipin synthase
no
0.32
7
HSERO
_RS11740
esterase
no
0.32
8
HSERO
_RS21945
hypothetical protein
no
0.32
9
HSERO
_RS15220
GntR family transcriptional regulator
no
0.32
10
HSERO
_RS07935
serine acetyltransferase
no
0.32
11
HSERO
_RS05310
AraC family transcriptional regulator
no
0.31
12
HSERO
_RS07695
ABC transporter permease
0.26
0.30
13
HSERO
_RS18650
histidine kinase
no
0.30
14
HSERO
_RS09180
transcriptional regulator
no
0.30
15
HSERO
_RS04430
phage late control protein
no
0.30
16
HSERO
_RS02650
dihydroxy-acid dehydratase
no
0.30
17
HSERO
_RS15545
membrane protein
no
0.29
18
HSERO
_RS15125
diguanylate cyclase
no
0.29
19
HSERO
_RS21655
elongation factor G
no
0.29
20
HSERO
_RS19450
indole-3-glycerol-phosphate synthase
no
0.29
Or look for
negative cofitness