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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS05030 from
Herbaspirillum seropedicae SmR1
hydrolase
SEED: Bll6428 protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS17000
ABC transporter for D-sorbitol/xylitol, substrate-binding component
(from data)
no
0.34
2
HSERO
_RS07875
peptide ABC transporter permease
no
0.31
3
HSERO
_RS09405
molybdenum cofactor biosynthesis protein MoeA
no
0.30
4
HSERO
_RS04325
helicase I
no
0.29
5
HSERO
_RS11815
hypothetical protein
no
0.29
6
HSERO
_RS06245
catalase-peroxidase
no
0.29
7
HSERO
_RS03270
protein RecA
no
0.27
8
HSERO
_RS04330
ATP-dependent exonuclease
no
0.27
9
HSERO
_RS05455
gamma-glutamyltranspeptidase
no
0.27
10
HSERO
_RS17015
sorbitol dehydrogenase (EC 1.1.1.14); xylitol dehydrogenase (EC 1.1.1.9)
(from data)
no
0.26
11
HSERO
_RS22345
urea carboxylase
no
0.26
12
HSERO
_RS11055
membrane protein
no
0.26
13
HSERO
_RS04555
capsid protein
no
0.26
14
HSERO
_RS22155
hypothetical protein
no
0.26
15
HSERO
_RS17025
AraC family transcriptional regulator
no
0.26
16
HSERO
_RS06815
multidrug transporter
no
0.26
17
HSERO
_RS06665
diguanylate cyclase
no
0.26
18
HSERO
_RS18600
transcriptional regulator
no
0.26
19
HSERO
_RS18970
hypothetical protein
no
0.25
20
HSERO
_RS01165
dihydroneopterin triphosphate pyrophosphatase
no
0.25
Or look for
negative cofitness