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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS04985 from
Herbaspirillum seropedicae SmR1
porin
SEED: Outer membrane protein (porin)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS21895
TonB-dependent receptor
no
0.40
2
HSERO
_RS19775
acriflavine resistance protein B
no
0.35
3
HSERO
_RS01785
hypothetical protein
no
0.33
4
HSERO
_RS11520
esterase
no
0.32
5
HSERO
_RS12715
hypothetical protein
no
0.32
6
HSERO
_RS22900
meta-pathway of phenol degradation protein
no
0.32
7
HSERO
_RS03800
hypothetical protein
no
0.31
8
HSERO
_RS03430
glutathione S-transferase
no
0.31
9
HSERO
_RS01955
methyl-accepting chemotaxis protein
no
0.31
10
HSERO
_RS03725
type VI secretion protein
no
0.30
11
HSERO
_RS00935
TonB-denpendent receptor
no
0.29
12
HSERO
_RS12540
hemerythrin
no
0.29
13
HSERO
_RS22020
membrane protein
no
0.29
14
HSERO
_RS19255
ABC transporter
no
0.29
15
HSERO
_RS01040
tail fiber protein
no
0.29
16
HSERO
_RS06280
GDP-mannose-dependent alpha-mannosyltransferase
no
0.29
17
HSERO
_RS06315
phosphate ABC transporter permease
no
0.29
18
HSERO
_RS00235
MFS transporter
no
0.28
19
HSERO
_RS12325
arabinose ABC transporter permease
no
0.28
20
HSERO
_RS05735
MFS transporter
no
0.28
Or look for
negative cofitness