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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS04895 from
Herbaspirillum seropedicae SmR1
AraC family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS09740
histidine kinase
no
0.37
2
HSERO
_RS12450
histidine kinase
no
0.36
3
HSERO
_RS14995
cystathionine beta-lyase
no
0.35
4
HSERO
_RS08530
glycine/betaine ABC transporter permease
no
0.35
5
HSERO
_RS13560
transcriptional regulator
no
0.34
6
HSERO
_RS00255
iron transporter FeoB
no
0.34
7
HSERO
_RS21010
LPS biosynthesis protein
no
0.34
8
HSERO
_RS17760
mechanosensitive ion channel protein MscS
no
0.34
9
HSERO
_RS21080
glycosyl transferase
no
0.33
10
HSERO
_RS21060
hypothetical protein
no
0.33
11
HSERO
_RS02455
UDP pyrophosphate phosphatase
no
0.33
12
HSERO
_RS16400
tryptophanyl-tRNA synthetase
no
0.33
13
HSERO
_RS08535
glycine/betaine ABC transporter substrate-binding protein
no
0.32
14
HSERO
_RS09725
ABC transporter
no
0.32
15
HSERO
_RS04585
hypothetical protein
no
0.32
16
HSERO
_RS20990
aminotransferase DegT
no
0.32
17
HSERO
_RS08565
RNA helicase
no
0.31
18
HSERO
_RS16405
peptidase M50
0.57
0.31
19
HSERO
_RS23655
phosphonate ABC transporter permease
no
0.31
20
HSERO
_RS09720
membrane protein
no
0.31
Or look for
negative cofitness