Top cofit genes for HSERO_RS04545 from Herbaspirillum seropedicae SmR1

integrase
SEED: Phage terminase, endonuclease subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	HSERO_RS15495		ABC transporter permease	no	0.26
2	HSERO_RS01195		amino acid ABC transporter permease	no	0.26
3	HSERO_RS18335		ABC transporter permease	no	0.22
4	HSERO_RS04400		transcriptional regulator	no	0.22
5	HSERO_RS06650		MarR family transcriptional regulator	no	0.22
6	HSERO_RS11200		peptidyl-prolyl cis-trans isomerase	0.68	0.22
7	HSERO_RS09870		chemotaxis protein CheY	no	0.22
8	HSERO_RS11830		hypothetical protein	no	0.22
9	HSERO_RS00225		glutamine amidotransferase	no	0.22
10	HSERO_RS15615		membrane protein	no	0.21
11	HSERO_RS17375		SOS mutagenesis protein	0.33	0.21
12	HSERO_RS17220		membrane protein	0.29	0.21
13	HSERO_RS06330		transcriptional regulator	no	0.21
14	HSERO_RS22130		hypothetical protein	no	0.20
15	HSERO_RS02445		proteinase inhibitor	no	0.20
16	HSERO_RS06530		muconolactone delta-isomerase	0.16	0.20
17	HSERO_RS17560		glutamate/aspartate transporter permease GltK	no	0.20
18	HSERO_RS09795		carbon starvation protein A	no	0.20
19	HSERO_RS04600		hypothetical protein	no	0.20
20	HSERO_RS07505		hypothetical protein	no	0.19

Or look for negative cofitness