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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS04225 from
Herbaspirillum seropedicae SmR1
permease
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS10455
aminotransferase
no
0.51
2
HSERO
_RS15560
phosphoadenosine phosphosulfate reductase
no
0.48
3
HSERO
_RS15565
sulfate adenylyltransferase subunit 2
0.42
0.48
4
HSERO
_RS22955
D-amino acid dehydrogenase
0.29
0.48
5
HSERO
_RS07160
phospho-2-dehydro-3-deoxyheptonate aldolase
no
0.48
6
HSERO
_RS15550
sulfite reductase
0.19
0.47
7
HSERO
_RS02650
dihydroxy-acid dehydratase
0.23
0.47
8
HSERO
_RS15570
sulfate adenylyltransferase
0.22
0.46
9
HSERO
_RS17185
2-isopropylmalate synthase
0.20
0.46
10
HSERO
_RS16515
isopropylmalate isomerase
0.25
0.46
11
HSERO
_RS11070
nicotinate-nucleotide pyrophosphorylase
0.11
0.46
12
HSERO
_RS13195
ATPase
no
0.45
13
HSERO
_RS19510
threonine dehydratase
0.52
0.45
14
HSERO
_RS05150
galactonate dehydratase
no
0.45
15
HSERO
_RS18430
chorismate mutase
no
0.45
16
HSERO
_RS01815
gamma-glutamyl kinase
no
0.45
17
HSERO
_RS08650
acetolactate synthase
0.19
0.45
18
HSERO
_RS16500
3-isopropylmalate dehydrogenase
0.22
0.44
19
HSERO
_RS15555
oxidoreductase
0.29
0.44
20
HSERO
_RS08405
membrane protein
0.27
0.44
Or look for
negative cofitness