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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS03620 from
Herbaspirillum seropedicae SmR1
LysR family transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS06535
LysR family transcriptional regulator
no
0.38
2
HSERO
_RS08295
hypothetical protein
no
0.37
3
HSERO
_RS06180
composite two-component transcription regulator protein
no
0.36
4
HSERO
_RS09370
hypothetical protein
no
0.34
5
HSERO
_RS22365
lipid kinase
0.34
0.34
6
HSERO
_RS07945
chloride channel protein
no
0.34
7
HSERO
_RS09530
hypothetical protein
no
0.32
8
HSERO
_RS01215
hypothetical protein
no
0.31
9
HSERO
_RS12065
hypothetical protein
no
0.30
10
HSERO
_RS20720
GMP synthase
no
0.30
11
HSERO
_RS23140
hypothetical protein
no
0.30
12
HSERO
_RS09015
bacteriocin ABC transporter permease
no
0.30
13
HSERO
_RS16925
chemotaxis protein CheR
no
0.30
14
HSERO
_RS03625
nicotinamidase-like protein
0.22
0.30
15
HSERO
_RS18010
pseudouridine synthase
no
0.29
16
HSERO
_RS14020
LysR family transcriptional regulator
no
0.29
17
HSERO
_RS04975
methionine ABC transporter permease
no
0.29
18
HSERO
_RS14150
RNA polymerase sigma factor
no
0.29
19
HSERO
_RS19070
acetyl-CoA acetyltransferase
no
0.29
20
HSERO
_RS10860
RNA pseudouridylate synthase
no
0.28
Or look for
negative cofitness