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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS03545 from
Herbaspirillum seropedicae SmR1
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS21880
FAD-dependent oxidoreductase
no
0.28
2
HSERO
_RS05235
L-fuconate dehydratase (EC 4.2.1.68)
(from data)
no
0.26
3
HSERO
_RS08080
poly[D(-)-3-hydroxyalkanoate] depolymerase
no
0.25
4
HSERO
_RS23415
hypothetical protein
no
0.25
5
HSERO
_RS17370
hypothetical protein
no
0.25
6
HSERO
_RS21665
oxygen-insensitive nitroreductase
no
0.25
7
HSERO
_RS23100
hypothetical protein
no
0.25
8
HSERO
_RS00200
LysR family transcriptional regulator
no
0.25
9
HSERO
_RS01095
hypothetical protein
no
0.24
10
HSERO
_RS06070
methyl-accepting chemotaxis protein
no
0.24
11
HSERO
_RS02965
gamma-glutamyl phosphate reductase
no
0.24
12
HSERO
_RS06735
LysR family transcriptional regulator
no
0.24
13
HSERO
_RS22160
cation transporter
no
0.24
14
HSERO
_RS20835
ABC transporter substrate-binding protein
no
0.23
15
HSERO
_RS18560
hypothetical protein
no
0.23
16
HSERO
_RS14000
hypothetical protein
no
0.23
17
HSERO
_RS11515
histidine kinase
no
0.23
18
HSERO
_RS22915
Fis family transcriptional regulator
no
0.22
19
HSERO
_RS15310
sulfoxide reductase catalytic subunit YedY
no
0.22
20
HSERO
_RS18825
membrane protein
no
0.22
Or look for
negative cofitness