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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS03050 from
Herbaspirillum seropedicae SmR1
hydrolase
KEGG: putative hydrolase of the HAD superfamily
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS02620
cobalt transporter
0.56
0.39
2
HSERO
_RS11620
4-carboxy muconolactone decarboxylase
no
0.37
3
HSERO
_RS07895
ABC transporter substrate-binding protein
no
0.36
4
HSERO
_RS18745
methyl-accepting chemotaxis protein
no
0.35
5
HSERO
_RS00245
hypothetical protein
no
0.35
6
HSERO
_RS18100
hypothetical protein
no
0.35
7
HSERO
_RS00800
hypothetical protein
no
0.34
8
HSERO
_RS17735
quinone oxidoreductase
0.13
0.34
9
HSERO
_RS19745
AraC family transcriptional regulator
no
0.34
10
HSERO
_RS18840
enoyl-CoA hydratase
no
0.33
11
HSERO
_RS20935
hypothetical protein
no
0.33
12
HSERO
_RS22345
urea carboxylase
no
0.32
13
HSERO
_RS22955
D-amino acid dehydrogenase
0.29
0.32
14
HSERO
_RS16585
iron ABC transporter permease
no
0.32
15
HSERO
_RS00535
TonB-dependent receptor
0.37
0.32
16
HSERO
_RS21210
membrane protein
no
0.32
17
HSERO
_RS08405
membrane protein
0.41
0.31
18
HSERO
_RS23065
psensor histidine kinase
no
0.31
19
HSERO
_RS13195
ATPase
no
0.31
20
HSERO
_RS19990
acetyl-CoA acetyltransferase
no
0.30
Or look for
negative cofitness