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Cofit
Protein
Homologs
Top cofit genes for HSERO_RS02255 from
Herbaspirillum seropedicae SmR1
decarboxylase
SEED: FIG00857679: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
HSERO
_RS06210
chromate transporter
no
0.61
2
HSERO
_RS08020
heavy metal translocating P-type ATPase
no
0.54
3
HSERO
_RS05820
IclR family transcriptional regulator
no
0.50
4
HSERO
_RS21345
cell division inhibitor MinD
no
0.50
5
HSERO
_RS09290
ribonuclease R
0.65
0.50
6
HSERO
_RS21340
septum formation inhibitor protein
no
0.48
7
HSERO
_RS09220
hypothetical protein
no
0.46
8
HSERO
_RS17880
membrane protein
no
0.42
9
HSERO
_RS10115
chemotaxis protein CheR
no
0.40
10
HSERO
_RS11615
hypothetical protein
no
0.40
11
HSERO
_RS20785
cytochrome oxidase subunit I
no
0.40
12
HSERO
_RS09265
peptidase C69
0.55
0.39
13
HSERO
_RS11610
NADH dehydrogenase
no
0.39
14
HSERO
_RS03510
proline aminopeptidase P II
no
0.38
15
HSERO
_RS01265
acetyl-CoA acetyltransferase
no
0.37
16
HSERO
_RS00425
ammonia channel protein
no
0.37
17
HSERO
_RS14955
chemotaxis protein
no
0.37
18
HSERO
_RS14830
RNA polymerase sigma factor RpoS
no
0.37
19
HSERO
_RS16145
leucyl/phenylalanyl-tRNA--protein transferase
no
0.37
20
HSERO
_RS12325
arabinose ABC transporter permease
no
0.37
Or look for
negative cofitness